Publications and Preprints

Peer-reviewed publications, accepted manuscripts in proof prior to publication, and preprints are listed here, with the most recent submissions first.

Preprints

  • Wu C.C., Tsantilas K.A., Park J., Plubell D.L., Naicker P., Govender I., Buthelezi S., Stoychev S., Jordaan J., Merrihew G.E., Huang E., Parker E.D., Riffle M., Hoofnagle A.N., MacCoss M.J. (2023). Mag-Net: Rapid enrichment of membrane-bound particles enables high coverage quantitative analysis of the plasma proteome. bioRxiv, 2023.06.10.544439; doi: 10.1101/2023.06.10.544439
    • Current status: In revisions with Nature Communications

Peer-reviewed, accepted manuscripts in proof

None at the moment – check back soon!

Peer-reviewed publications

  • Tsantilas K.A., Merrihew G.E., Robbins J.E., Johnson R.S., Park J., Plubell D.L., Canterbury J.D., Huang E., Riffle M., Sharma V., MacLean B.X., Eckels J., Wu C.C., Bereman M.B., Spencer S.E., Hoofnagle A.N., MacCoss M.J. (2024). A Framework for Quality Control in Quantitative Proteomics. Journal of proteome Research. 10.1021/acs.jproteome.4c00363
  • Sanchez-Contreras M., Sweetwyne M.T., Tsantilas K.A., Whitson J.A., Campbell M.D., Kohrn B.F., Kim H.J., Hipp M.J., Fredrickson J., Nguyen M.M., Hurley J.B., Marcinek D.J., Rabinovitch P.S., Kennedy S.R.. (2023) The multi-tissue landscape of somatic mtdna mutations indicates tissue specific accumulation and removal in aging. Elife. 12:e83395. 10.7554/eLife.83395
  • Tsantilas K.A., Cleghorn W.M., Bisbach C.M., Whitson J.A., Hass D.T., Robbings B.M., Sadilek M., Linton J.D., Rountree A.M., Valencia A.P., Sweetwyne M.T., Campbell M.D., Zhang H., Jankowski C.S.R., Sweet I.R., Marcinek D.J., Rabinovitch P.S., & Hurley J.B. (2021). An analysis of metabolic changes in the retina and retinal pigment epithelium of aging mice. Investigative Ophthalmology and Visual Science, 62(14). 10.1167/iovs.62.14.20
  • Sanchez-Contreras M., Sweetwyne M.T., Kohrn B.F., Tsantilas K.A., Hipp M.J., Schmidt E.K., Fredrickson J., Whitson J.A., Campbell M.D., Rabinovitch P.S., Marcinek D.J., & Kennedy S.R. (2021). A replication-linked mutational gradient drives somatic mutation accumulation and influences germline polymorphisms and genome composition in mitochondrial DNA. Nucleic Acids Research, 49(19), 11103–11118. 10.1093/nar/gkab901
  • Fredolini C., Pathak K. v., Paris L., Chapple K.M., Tsantilas K.A., Rosenow M., Tegeler T.J., Garcia-Mansfield K., Tamburro D., Zhou W., Russo P., Massarut S., Facchiano F., Belluco C., de Maria R., Garaci E., Liotta L., Petricoin E.F., & Pirrotte P. (2020). Shotgun proteomics coupled to nanoparticle-based biomarker enrichment reveals a novel panel of extracellular matrix proteins as candidate serum protein biomarkers for early-stage breast cancer detection. Breast Cancer Research, 22(1), 1–16. 10.1186/s13058-020-01373-9
  • Giarmarco M.M., Brock D.C., Robbings B.M., Cleghorn W.M., Tsantilas K.A., Kuch K.C., Ge W., Rutter K.M., Parker E.D., Hurley J.B., & Brockerhoff S.E. (2020). Daily mitochondrial dynamics in cone photoreceptors. Proceedings of the National Academy of Sciences of the United States of America, 117(46), 28816–28827. 10.1073/pnas.2007827117
  • Rajala A., Wang Y., Brush R.S., Tsantilas K., Jankowski C.S.R., Lindsay K.J., Linton J.D., Hurley J.B., Anderson R.E., & Rajala R.V.S. (2018). Pyruvate kinase M2 regulates photoreceptor structure, function, and viability article. Cell Death and Disease. 10.1038/s41419-018-0296-4
  • Kanow M.A., Giarmarco M.M., Jankowski C.S.R., Tsantilas K., Engel A.L., Du J., Linton J.D., Farnsworth C.C., Sloat S.R., Rountree A., Sweet I.R., Lindsay K.J., Parker E.D., Brockerhoff S.E., Sadilek M., Chao J.R., & Hurley J.B. (2017). Biochemical adaptations of the retina and retinal pigment epithelium support a metabolic ecosystem in the vertebrate eye. ELife, 6, 1–25. 10.7554/eLife.28899
  • Li Y., Collins M., An J., Geiser R., Tegeler T., Tsantilas K., Garcia K., Pirrotte P., & Bowser R. (2016). Immunoprecipitation and mass spectrometry defines an extensive RBM45 protein–protein interaction network. Brain Research, 1647, 79–93. 10.1016/j.brainres.2016.02.047

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